Edit me

The following pages and posts are tagged with

Depositing RNAseq data to GEO Page This page will walk you through the steps to make your data publicly available so you can meet the requirements for manuscript submission and publication
RStudio Server Page How to access RStudio through your web browser
Kallisto Page Kallisto is our first choice for aligning reads because it combines speed, accuracy, and ability to leverage bootstraps for modeling technical variance
CHMI linux cluster Page CHMI maintains a custom configured compute server that runs Linux Ubuntu 16.04 LTS. This machine has two 6-core Intel Xeon E5-2643v4 CPUs (12 cores total), ...
analysis of 16S rRNA gene sequencing data Page Preparation of V4 region, 16S dual-indexed libraries for sequencing on an Illumina platform
QIIME2 workflow Page Using the Quantitative Insights Into Microbial Ecology (QIIME2) software pipeline for analysis of marker gene-based microbiome sequencing data
Bioinformatics Software Page A summary of the bioinformatics software currently installed on our Linux cluster.